Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Gm13365-201ENSMUST00000121188 973 ntBASIC14.08□□□□□ -0.16
SynpoQ8CC35 Gm11745-201ENSMUST00000121669 448 ntBASIC14.08□□□□□ -0.16
SynpoQ8CC35 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Auts2-212ENSMUST00000178555 309 ntBASIC14.08□□□□□ -0.16
SynpoQ8CC35 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.08□□□□□ -0.16
SynpoQ8CC35 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynpoQ8CC35 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm2272-201ENSMUST00000194903 582 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm44335-201ENSMUST00000196879 141 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm44297-201ENSMUST00000198304 141 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm44346-201ENSMUST00000198851 141 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm5312-201ENSMUST00000203728 547 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.07□□□□□ -0.16
SynpoQ8CC35 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SynpoQ8CC35 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.06□□□□□ -0.16
SynpoQ8CC35 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynpoQ8CC35 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms