Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Uba3Q8C878 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.33■□□□□ 0.04
Uba3Q8C878 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Uba3Q8C878 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Uba3Q8C878 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Uba3Q8C878 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Uba3Q8C878 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 Gm18737-201ENSMUST00000173594 937 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.31■□□□□ 0.04
Uba3Q8C878 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 Gm9182-201ENSMUST00000217829 639 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.31■□□□□ 0.04
Uba3Q8C878 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Uba3Q8C878 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.31■□□□□ 0.04
Uba3Q8C878 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Uba3Q8C878 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Uba3Q8C878 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.3■□□□□ 0.04
Uba3Q8C878 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.3■□□□□ 0.04
Uba3Q8C878 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.3■□□□□ 0.04
Uba3Q8C878 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.3■□□□□ 0.04
Uba3Q8C878 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.3■□□□□ 0.04
Uba3Q8C878 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.3■□□□□ 0.04
Uba3Q8C878 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Uba3Q8C878 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Uba3Q8C878 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Uba3Q8C878 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms