Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc60Q8C4J0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc60Q8C4J0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22065-201ENSMUST00000103753 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22066-201ENSMUST00000103761 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24932-201ENSMUST00000103763 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24115-201ENSMUST00000103799 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22190-201ENSMUST00000103827 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22191-201ENSMUST00000103831 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24721-201ENSMUST00000103849 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm28018-201ENSMUST00000103869 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm26399-201ENSMUST00000103937 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm14701-201ENSMUST00000117156 348 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25349-201ENSMUST00000177728 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm23616-201ENSMUST00000177797 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25871-201ENSMUST00000177816 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24752-201ENSMUST00000178240 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24496-201ENSMUST00000178287 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25649-201ENSMUST00000178476 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25548-201ENSMUST00000178681 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm23147-201ENSMUST00000178841 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm26095-201ENSMUST00000179270 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22171-201ENSMUST00000179283 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm23936-201ENSMUST00000179354 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm22619-201ENSMUST00000179516 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25255-201ENSMUST00000179579 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24755-201ENSMUST00000179691 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm26506-201ENSMUST00000179692 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm25086-201ENSMUST00000179931 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm23243-201ENSMUST00000180047 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24659-201ENSMUST00000180212 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm24169-201ENSMUST00000180244 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm23689-201ENSMUST00000180354 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm27359-201ENSMUST00000184153 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm27785-201ENSMUST00000184268 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm27466-201ENSMUST00000184396 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm27703-201ENSMUST00000184836 110 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm5312-201ENSMUST00000203728 547 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc60Q8C4J0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc60Q8C4J0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms