Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm1401-201ENSMUST00000122048 772 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Gm2308-201ENSMUST00000166539 1004 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 Gm7286-201ENSMUST00000182691 1007 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Gm18206-201ENSMUST00000207027 926 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13□□□□□ -0.33
Rft1Q8C3B8 AC122024.2-201ENSMUST00000220086 871 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13□□□□□ -0.33
Rft1Q8C3B8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rft1Q8C3B8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rft1Q8C3B8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rft1Q8C3B8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Gm11764-201ENSMUST00000120221 623 ntBASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.98□□□□□ -0.33
Rft1Q8C3B8 AW822252-206ENSMUST00000208904 237 ntBASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rft1Q8C3B8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rft1Q8C3B8 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.97□□□□□ -0.33
Rft1Q8C3B8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms