Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tsen54Q8C2A2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Tsen54Q8C2A2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tsen54Q8C2A2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tsen54Q8C2A2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tsen54Q8C2A2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Gm34391-201ENSMUST00000203706 907 ntBASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tsen54Q8C2A2 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm25406-201ENSMUST00000157599 105 ntBASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm25745-201ENSMUST00000174945 133 ntBASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm43347-201ENSMUST00000200226 580 ntBASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tsen54Q8C2A2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gm27459-201ENSMUST00000184860 107 ntBASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gm27741-201ENSMUST00000185060 237 ntBASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gm9172-201ENSMUST00000212092 954 ntBASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.17□□□□□ -0.46
Tsen54Q8C2A2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms