Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Gm38002-201ENSMUST00000193255 180 ntBASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm5479-201ENSMUST00000160578 435 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm45453-201ENSMUST00000211758 853 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm3222-201ENSMUST00000071282 990 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm12585-201ENSMUST00000117307 290 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Chd9Q8BYH8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Gm17376-201ENSMUST00000166016 84 ntBASIC11.31□□□□□ -0.6
Chd9Q8BYH8 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Gm5279-201ENSMUST00000199575 745 ntBASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.31□□□□□ -0.6
Chd9Q8BYH8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Chd9Q8BYH8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms