Protein–RNA interactions for Protein: Q8BW72

Kdm4a, Lysine-specific demethylase 4A, mousemouse

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4aQ8BW72 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Gm5177-201ENSMUST00000183092 997 ntBASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kdm4aQ8BW72 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm11779-201ENSMUST00000118541 368 ntBASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kdm4aQ8BW72 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Gm37935-201ENSMUST00000192012 982 ntBASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kdm4aQ8BW72 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm16198-201ENSMUST00000118766 670 ntBASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm2272-201ENSMUST00000194903 582 ntBASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm45747-201ENSMUST00000212203 999 ntBASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kdm4aQ8BW72 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms