Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm5566-201ENSMUST00000116118 459 ntBASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.88□□□□□ -0.03
Nup54Q8BTS4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nup54Q8BTS4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Gm28630-201ENSMUST00000187806 498 ntBASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nup54Q8BTS4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Gm9719-201ENSMUST00000162765 543 ntBASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nup54Q8BTS4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms