Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.58■□□□□ 0.24
Scfd1Q8BRF7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Efs-202ENSMUST00000227037 2540 ntBASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scfd1Q8BRF7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scfd1Q8BRF7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Carlr-201ENSMUST00000181515 2574 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Gm9522-201ENSMUST00000182394 926 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Gm33320-201ENSMUST00000192232 530 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Gm6218-201ENSMUST00000219812 628 ntBASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scfd1Q8BRF7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scfd1Q8BRF7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms