Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm14928-201ENSMUST00000120198 477 ntBASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm24694-201ENSMUST00000180054 110 ntBASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm27663-201ENSMUST00000184839 110 ntBASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm20445-201ENSMUST00000061905 565 ntBASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rd3Q8BRE0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm8749-201ENSMUST00000117737 331 ntBASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm15653-201ENSMUST00000119247 907 ntBASIC15.4■□□□□ 0.06
Rd3Q8BRE0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm43703-201ENSMUST00000200523 763 ntBASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rd3Q8BRE0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm9794-201ENSMUST00000202370 423 ntBASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rd3Q8BRE0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rd3Q8BRE0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms