Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdhr3Q8BL00 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdhr3Q8BL00 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdhr3Q8BL00 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.7□□□□□ -0.38
Cdhr3Q8BL00 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Gm7862-201ENSMUST00000121461 292 ntBASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdhr3Q8BL00 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms