Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pcdh20Q8BIZ0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh20Q8BIZ0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Celf4-206ENSMUST00000224553 1729 ntBASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh20Q8BIZ0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh20Q8BIZ0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh20Q8BIZ0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh20Q8BIZ0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdh20Q8BIZ0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm12008-201ENSMUST00000117791 755 ntBASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Gm2756-201ENSMUST00000195851 400 ntBASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.2□□□□□ -0.14
Pcdh20Q8BIZ0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms