Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm8749-201ENSMUST00000117737 331 ntBASIC14.06□□□□□ -0.16
Rnf38Q8BI21 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rnf38Q8BI21 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.05□□□□□ -0.16
Rnf38Q8BI21 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Gm9726-201ENSMUST00000180321 678 ntBASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf38Q8BI21 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Mir5131-201ENSMUST00000175426 93 ntBASIC14.04□□□□□ -0.16
Rnf38Q8BI21 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 AV026068-213ENSMUST00000223675 1171 ntBASIC14.04□□□□□ -0.16
Rnf38Q8BI21 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Acot6-202ENSMUST00000222921 3622 ntBASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf38Q8BI21 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms