Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Gm9522-201ENSMUST00000182394 926 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Gm8515-201ENSMUST00000194852 576 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nod1Q8BHB0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Mir125a-201ENSMUST00000083545 68 ntBASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nod1Q8BHB0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm18187-201ENSMUST00000196476 984 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm42612-201ENSMUST00000197986 623 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm43170-201ENSMUST00000199827 612 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Olfr286-202ENSMUST00000205305 969 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nod1Q8BHB0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms