Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Slc5a7Q8BGY9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm15165-201ENSMUST00000118140 502 ntBASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm8655-201ENSMUST00000221159 852 ntBASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Slc5a7Q8BGY9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms