Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim50Q810I2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim50Q810I2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.16□□□□□ -0.14
Trim50Q810I2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.16□□□□□ -0.14
Trim50Q810I2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.16□□□□□ -0.14
Trim50Q810I2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.16□□□□□ -0.14
Trim50Q810I2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim50Q810I2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim50Q810I2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.15□□□□□ -0.14
Trim50Q810I2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim50Q810I2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trim50Q810I2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim50Q810I2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim50Q810I2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim50Q810I2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms