Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.83□□□□□ -0.04
Ddx42Q810A7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.83□□□□□ -0.04
Ddx42Q810A7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx42Q810A7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.82□□□□□ -0.04
Ddx42Q810A7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.82□□□□□ -0.04
Ddx42Q810A7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx42Q810A7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.81□□□□□ -0.04
Ddx42Q810A7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ddx42Q810A7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx42Q810A7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms