Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.31□□□□□ -0.44
Upk3bQ80YF6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk3bQ80YF6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Gm8749-201ENSMUST00000117737 331 ntBASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3bQ80YF6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Gm18246-201ENSMUST00000221023 728 ntBASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3bQ80YF6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms