Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nrde2Q80XC6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nrde2Q80XC6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nrde2Q80XC6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Gm28630-201ENSMUST00000187806 498 ntBASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Gm44855-201ENSMUST00000205725 362 ntBASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.8□□□□□ -0.04
Nrde2Q80XC6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Gm13015-201ENSMUST00000118674 204 ntBASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Gm44344-201ENSMUST00000200287 129 ntBASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nrde2Q80XC6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 BC037039-201ENSMUST00000192003 2205 ntBASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Gm18766-201ENSMUST00000189811 808 ntBASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Gm29541-201ENSMUST00000191351 678 ntBASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nrde2Q80XC6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms