Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Gm6916-202ENSMUST00000205523 195 ntBASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Usp6nlQ80XC3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Usp6nlQ80XC3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Usp6nlQ80XC3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Usp6nlQ80XC3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Usp6nlQ80XC3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms