Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm8602-201ENSMUST00000184045 607 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm8515-201ENSMUST00000194852 576 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm18062-201ENSMUST00000208020 547 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm18055-201ENSMUST00000208254 547 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gm9899-201ENSMUST00000065519 555 ntBASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prpf40bQ80W14 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Gm27533-201ENSMUST00000183800 152 ntBASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prpf40bQ80W14 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Prpf40bQ80W14 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm24694-201ENSMUST00000180054 110 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm27663-201ENSMUST00000184839 110 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mir6420-201ENSMUST00000185032 102 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm6007-201ENSMUST00000208170 823 ntBASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prpf40bQ80W14 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Mir1938-201ENSMUST00000158746 100 ntBASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf40bQ80W14 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms