Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slit1Q80TR4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Mir497b-201ENSMUST00000093601 125 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.31■□□□□ 0.52
Slit1Q80TR4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Gm42471-201ENSMUST00000201457 1865 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slit1Q80TR4 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.31■□□□□ 0.52
Slit1Q80TR4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Gm24420-201ENSMUST00000176676 59 ntBASIC18.3■□□□□ 0.52
Slit1Q80TR4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.3■□□□□ 0.52
Slit1Q80TR4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.3■□□□□ 0.52
Slit1Q80TR4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.3■□□□□ 0.52
Slit1Q80TR4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slit1Q80TR4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm12485-201ENSMUST00000119641 291 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm8927-201ENSMUST00000181978 981 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm27847-201ENSMUST00000183711 107 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm27375-201ENSMUST00000183799 107 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm3222-201ENSMUST00000071282 990 ntBASIC18.29■□□□□ 0.52
Slit1Q80TR4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slit1Q80TR4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Gm27514-201ENSMUST00000183692 110 ntBASIC18.28■□□□□ 0.52
Slit1Q80TR4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.28■□□□□ 0.52
Slit1Q80TR4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Gm11803-201ENSMUST00000119966 444 ntBASIC18.28■□□□□ 0.52
Slit1Q80TR4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.28■□□□□ 0.52
Slit1Q80TR4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.28■□□□□ 0.52
Slit1Q80TR4 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.28■□□□□ 0.52
Slit1Q80TR4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slit1Q80TR4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slit1Q80TR4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms