Protein–RNA interactions for Protein: Q80SW5

Etd, ETD, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EtdQ80SW5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
EtdQ80SW5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
EtdQ80SW5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.3□□□□□ -0.6
EtdQ80SW5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
EtdQ80SW5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
EtdQ80SW5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Grk6-207ENSMUST00000225925 2769 ntBASIC11.29□□□□□ -0.6
EtdQ80SW5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.29□□□□□ -0.6
EtdQ80SW5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.29□□□□□ -0.6
EtdQ80SW5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
EtdQ80SW5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Gm12527-201ENSMUST00000117967 564 ntBASIC11.28□□□□□ -0.6
EtdQ80SW5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.28□□□□□ -0.6
EtdQ80SW5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.28□□□□□ -0.6
EtdQ80SW5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
EtdQ80SW5 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.28□□□□□ -0.6
EtdQ80SW5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
EtdQ80SW5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
EtdQ80SW5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
EtdQ80SW5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
EtdQ80SW5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
EtdQ80SW5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
EtdQ80SW5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
EtdQ80SW5 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms