Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn4bQ7M729 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gm15483-201ENSMUST00000120338 456 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gm17271-201ENSMUST00000165535 355 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.17□□□□□ -0.14
Scn4bQ7M729 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn4bQ7M729 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.16□□□□□ -0.14
Scn4bQ7M729 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Rpph1-201ENSMUST00000175096 319 ntBASIC14.16□□□□□ -0.14
Scn4bQ7M729 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.16□□□□□ -0.14
Scn4bQ7M729 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.16□□□□□ -0.14
Scn4bQ7M729 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.16□□□□□ -0.14
Scn4bQ7M729 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn4bQ7M729 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.15□□□□□ -0.14
Scn4bQ7M729 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Gm15427-201ENSMUST00000117288 531 ntBASIC14.15□□□□□ -0.14
Scn4bQ7M729 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.15□□□□□ -0.14
Scn4bQ7M729 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn4bQ7M729 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms