Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.24□□□□□ -0.45
Smim12Q78RX3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smim12Q78RX3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gm4899-201ENSMUST00000178708 719 ntBASIC12.23□□□□□ -0.45
Smim12Q78RX3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.23□□□□□ -0.45
Smim12Q78RX3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.23□□□□□ -0.45
Smim12Q78RX3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smim12Q78RX3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gm15173-201ENSMUST00000122049 433 ntBASIC12.22□□□□□ -0.45
Smim12Q78RX3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gm28033-201ENSMUST00000184224 96 ntBASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gm34391-201ENSMUST00000203706 907 ntBASIC12.22□□□□□ -0.45
Smim12Q78RX3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.22□□□□□ -0.45
Smim12Q78RX3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Smim12Q78RX3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms