Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx55Q6ZPL9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm2495-201ENSMUST00000191160 466 ntBASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx55Q6ZPL9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Gm15240-201ENSMUST00000118156 720 ntBASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx55Q6ZPL9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Gm45841-201ENSMUST00000207700 164 ntBASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx55Q6ZPL9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms