Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.23□□□□□ -0.45
Rif1Q6PR54 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rif1Q6PR54 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm9550-201ENSMUST00000161130 862 ntBASIC12.22□□□□□ -0.45
Rif1Q6PR54 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm27438-201ENSMUST00000183480 110 ntBASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.22□□□□□ -0.45
Rif1Q6PR54 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Mir125a-201ENSMUST00000083545 68 ntBASIC12.22□□□□□ -0.45
Rif1Q6PR54 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rif1Q6PR54 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12616-201ENSMUST00000118594 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12624-201ENSMUST00000177615 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12621-201ENSMUST00000177760 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12615-201ENSMUST00000177970 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12622-201ENSMUST00000177975 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12627-201ENSMUST00000178412 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12625-201ENSMUST00000179122 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12614-201ENSMUST00000179586 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm12613-201ENSMUST00000180323 382 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Gm6082-201ENSMUST00000215204 454 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.21□□□□□ -0.45
Rif1Q6PR54 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.21□□□□□ -0.45
Rif1Q6PR54 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rif1Q6PR54 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.21□□□□□ -0.46
Rif1Q6PR54 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.21□□□□□ -0.46
Rif1Q6PR54 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.21□□□□□ -0.46
Rif1Q6PR54 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rif1Q6PR54 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.21□□□□□ -0.46
Rif1Q6PR54 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms