Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nudcd1Q6PIP5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Gm13823-201ENSMUST00000119930 345 ntBASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 BC037039-201ENSMUST00000192003 2205 ntBASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nudcd1Q6PIP5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm5566-201ENSMUST00000116118 459 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm14767-201ENSMUST00000121559 586 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm17837-201ENSMUST00000186435 985 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm9182-201ENSMUST00000217829 639 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd1Q6PIP5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Gm9726-201ENSMUST00000180321 678 ntBASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Mir7684-201ENSMUST00000183858 60 ntBASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd1Q6PIP5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms