Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Gm13689-201ENSMUST00000119360 685 ntBASIC16.88■□□□□ 0.29
Nup98Q6PFD9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nup98Q6PFD9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.87■□□□□ 0.29
Nup98Q6PFD9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Gm2445-201ENSMUST00000182798 989 ntBASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nup98Q6PFD9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm18307-201ENSMUST00000206864 949 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nup98Q6PFD9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Gm5035-201ENSMUST00000215581 927 ntBASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nup98Q6PFD9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms