Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf220Q6PDX6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf220Q6PDX6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf220Q6PDX6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.8□□□□□ -0.2
Rnf220Q6PDX6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms