Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chd4Q6PDQ2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm11425-201ENSMUST00000119608 498 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm9396-201ENSMUST00000076703 567 ntBASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd4Q6PDQ2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gm4984-201ENSMUST00000115987 360 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gm24196-201ENSMUST00000179161 110 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.67■□□□□ 0.58
Chd4Q6PDQ2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chd4Q6PDQ2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chd4Q6PDQ2 Gm23931-201ENSMUST00000103842 109 ntBASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.64■□□□□ 0.58
Chd4Q6PDQ2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms