Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Gm24589-201ENSMUST00000116692 94 ntBASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Gm45167-201ENSMUST00000208007 322 ntBASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcd3Q6P9Z1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcd3Q6P9Z1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcd3Q6P9Z1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms