Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scube1Q6NZL8 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Gm5864-201ENSMUST00000202263 970 ntBASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scube1Q6NZL8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Mir8098-201ENSMUST00000184011 137 ntBASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scube1Q6NZL8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Scube1Q6NZL8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14□□□□□ -0.17
Scube1Q6NZL8 Gm11452-201ENSMUST00000122376 690 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14□□□□□ -0.17
Scube1Q6NZL8 Gm25745-201ENSMUST00000174945 133 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Scube1Q6NZL8 AC133598.3-202ENSMUST00000224219 531 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14□□□□□ -0.17
Scube1Q6NZL8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Scube1Q6NZL8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 Gm18244-201ENSMUST00000219747 1566 ntBASIC14□□□□□ -0.17
Scube1Q6NZL8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scube1Q6NZL8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms