Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm11964-201ENSMUST00000120982 444 ntBASIC11.74□□□□□ -0.53
Col7a1Q63870 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.74□□□□□ -0.53
Col7a1Q63870 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Col7a1Q63870 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col7a1Q63870 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.74□□□□□ -0.53
Col7a1Q63870 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.74□□□□□ -0.53
Col7a1Q63870 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.74□□□□□ -0.53
Col7a1Q63870 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.74□□□□□ -0.53
Col7a1Q63870 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col7a1Q63870 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col7a1Q63870 Gm11331-201ENSMUST00000119764 288 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm4607-201ENSMUST00000206649 577 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.73□□□□□ -0.53
Col7a1Q63870 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.73□□□□□ -0.53
Col7a1Q63870 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col7a1Q63870 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Col7a1Q63870 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col7a1Q63870 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.72□□□□□ -0.53
Col7a1Q63870 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Col7a1Q63870 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col7a1Q63870 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms