Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Gm29649-201ENSMUST00000185649 419 ntBASIC16.84■□□□□ 0.29
Scn9aQ62205 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn9aQ62205 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Scn9aQ62205 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn9aQ62205 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Scn9aQ62205 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn9aQ62205 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn9aQ62205 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn9aQ62205 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.83■□□□□ 0.29
Scn9aQ62205 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Scn9aQ62205 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Gm40466-201ENSMUST00000212174 422 ntBASIC16.83■□□□□ 0.28
Scn9aQ62205 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn9aQ62205 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.83■□□□□ 0.28
Scn9aQ62205 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn9aQ62205 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scn9aQ62205 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn9aQ62205 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Gm19184-201ENSMUST00000196798 928 ntBASIC16.82■□□□□ 0.28
Scn9aQ62205 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.82■□□□□ 0.28
Scn9aQ62205 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn9aQ62205 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.82■□□□□ 0.28
Scn9aQ62205 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn9aQ62205 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.81■□□□□ 0.28
Scn9aQ62205 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn9aQ62205 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn9aQ62205 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Gm13350-201ENSMUST00000120519 479 ntBASIC16.8■□□□□ 0.28
Scn9aQ62205 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn9aQ62205 Gm44608-201ENSMUST00000206827 855 ntBASIC16.8■□□□□ 0.28
Scn9aQ62205 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms