Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim27Q62158 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim27Q62158 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim27Q62158 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.86■□□□□ 0.45
Trim27Q62158 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim27Q62158 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 Mir1895-201ENSMUST00000122615 79 ntBASIC17.85■□□□□ 0.45
Trim27Q62158 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim27Q62158 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim27Q62158 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.85■□□□□ 0.45
Trim27Q62158 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.85■□□□□ 0.45
Trim27Q62158 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim27Q62158 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Gm14822-201ENSMUST00000122247 291 ntBASIC17.84■□□□□ 0.45
Trim27Q62158 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.84■□□□□ 0.45
Trim27Q62158 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim27Q62158 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim27Q62158 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.83■□□□□ 0.45
Trim27Q62158 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim27Q62158 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Trim27Q62158 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim27Q62158 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim27Q62158 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim27Q62158 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim27Q62158 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim27Q62158 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim27Q62158 Gm18737-201ENSMUST00000173594 937 ntBASIC17.83■□□□□ 0.44
Trim27Q62158 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim27Q62158 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.83■□□□□ 0.44
Trim27Q62158 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.83■□□□□ 0.44
Trim27Q62158 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trim27Q62158 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.83■□□□□ 0.44
Trim27Q62158 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim27Q62158 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms