Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.06□□□□□ -0.48
Phox2aQ62066 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.06□□□□□ -0.48
Phox2aQ62066 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Phox2aQ62066 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Phox2aQ62066 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Gm5587-201ENSMUST00000206270 674 ntBASIC12.05□□□□□ -0.48
Phox2aQ62066 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Phox2aQ62066 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Phox2aQ62066 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.04□□□□□ -0.48
Phox2aQ62066 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.04□□□□□ -0.48
Phox2aQ62066 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.04□□□□□ -0.48
Phox2aQ62066 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Phox2aQ62066 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Phox2aQ62066 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phox2aQ62066 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Phox2aQ62066 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.03□□□□□ -0.48
Phox2aQ62066 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Phox2aQ62066 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms