Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.4□□□□□ -0.26
VcanQ62059 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.4□□□□□ -0.26
VcanQ62059 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VcanQ62059 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.4□□□□□ -0.26
VcanQ62059 Gm13786-201ENSMUST00000122371 333 ntBASIC13.4□□□□□ -0.26
VcanQ62059 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.4□□□□□ -0.26
VcanQ62059 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VcanQ62059 Gm43133-201ENSMUST00000197472 463 ntBASIC13.4□□□□□ -0.26
VcanQ62059 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.4□□□□□ -0.26
VcanQ62059 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.4□□□□□ -0.26
VcanQ62059 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VcanQ62059 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.4□□□□□ -0.26
VcanQ62059 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
VcanQ62059 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
VcanQ62059 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.39□□□□□ -0.27
VcanQ62059 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.39□□□□□ -0.27
VcanQ62059 Gm2383-201ENSMUST00000181461 807 ntBASIC13.39□□□□□ -0.27
VcanQ62059 Gm6082-201ENSMUST00000215204 454 ntBASIC13.39□□□□□ -0.27
VcanQ62059 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
VcanQ62059 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VcanQ62059 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.39□□□□□ -0.27
VcanQ62059 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
VcanQ62059 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.39□□□□□ -0.27
VcanQ62059 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.39□□□□□ -0.27
VcanQ62059 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.39□□□□□ -0.27
VcanQ62059 Gm19078-201ENSMUST00000206311 727 ntBASIC13.39□□□□□ -0.27
VcanQ62059 Gm6334-201ENSMUST00000207083 228 ntBASIC13.39□□□□□ -0.27
VcanQ62059 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VcanQ62059 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VcanQ62059 Gm8959-201ENSMUST00000213150 571 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Gm15376-201ENSMUST00000122258 783 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Mir5120-201ENSMUST00000175020 78 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Proscos-202ENSMUST00000178990 666 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Olfr284-202ENSMUST00000206647 966 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VcanQ62059 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.38□□□□□ -0.27
VcanQ62059 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Carlr-201ENSMUST00000181515 2574 ntBASIC13.38□□□□□ -0.27
VcanQ62059 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VcanQ62059 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VcanQ62059 Gm24255-201ENSMUST00000104481 128 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms