Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.86□□□□□ -0.19
Rai1Q61818 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.86□□□□□ -0.19
Rai1Q61818 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.86□□□□□ -0.19
Rai1Q61818 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.86□□□□□ -0.19
Rai1Q61818 Gm15957-201ENSMUST00000118893 974 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 Gm8062-201ENSMUST00000139696 444 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rai1Q61818 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 Gm6244-201ENSMUST00000178732 841 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 Gm21470-201ENSMUST00000187680 696 ntBASIC13.86□□□□□ -0.19
Rai1Q61818 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.86□□□□□ -0.19
Rai1Q61818 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rai1Q61818 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rai1Q61818 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.85□□□□□ -0.19
Rai1Q61818 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.85□□□□□ -0.19
Rai1Q61818 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.85□□□□□ -0.19
Rai1Q61818 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.85□□□□□ -0.19
Rai1Q61818 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.85□□□□□ -0.19
Rai1Q61818 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rai1Q61818 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.85□□□□□ -0.19
Rai1Q61818 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.85□□□□□ -0.19
Rai1Q61818 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Rai1Q61818 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rai1Q61818 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm15240-201ENSMUST00000118156 720 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.84□□□□□ -0.19
Rai1Q61818 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.84□□□□□ -0.19
Rai1Q61818 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm44608-201ENSMUST00000206827 855 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Gm4804-201ENSMUST00000182234 999 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.84□□□□□ -0.19
Rai1Q61818 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.84□□□□□ -0.19
Rai1Q61818 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rai1Q61818 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms