Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd1Q61466 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd1Q61466 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd1Q61466 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd1Q61466 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcd1Q61466 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm24543-201ENSMUST00000103867 82 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm10275-202ENSMUST00000168697 495 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm38294-201ENSMUST00000192831 381 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gm10275-201ENSMUST00000092620 635 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.14■□□□□ 0.01
Smarcd1Q61466 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcd1Q61466 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.13■□□□□ 0.01
Smarcd1Q61466 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm13223-201ENSMUST00000118609 747 ntBASIC15.13■□□□□ 0.01
Smarcd1Q61466 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm17837-201ENSMUST00000186435 985 ntBASIC15.13■□□□□ 0.01
Smarcd1Q61466 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcd1Q61466 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm13453-201ENSMUST00000118708 357 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm27533-201ENSMUST00000183800 152 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm27631-201ENSMUST00000184163 466 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 Mir7023-201ENSMUST00000185093 64 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.12■□□□□ 0.01
Smarcd1Q61466 Gm6888-201ENSMUST00000221983 706 ntBASIC15.12■□□□□ 0.01
Smarcd1Q61466 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms