Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Gm15483-201ENSMUST00000120338 456 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Gm5479-201ENSMUST00000160578 435 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 AW822252-206ENSMUST00000208904 237 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Rnf20Q5DTM8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf20Q5DTM8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Gm11543-201ENSMUST00000120758 370 ntBASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Gm11025-201ENSMUST00000140773 466 ntBASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf20Q5DTM8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Gm8000-201ENSMUST00000188378 592 ntBASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Gm5264-201ENSMUST00000190584 848 ntBASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf20Q5DTM8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms