Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Efs-202ENSMUST00000227037 2540 ntBASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Gm27838-201ENSMUST00000184829 128 ntBASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Prpf38aQ4FK66 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf38aQ4FK66 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Gm5866-201ENSMUST00000177881 973 ntBASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 AA619741-201ENSMUST00000195095 646 ntBASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Gm43703-201ENSMUST00000200523 763 ntBASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf38aQ4FK66 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Mir125a-201ENSMUST00000083545 68 ntBASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 BC001981-202ENSMUST00000191393 1545 ntBASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf38aQ4FK66 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms