Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lrrfip1Q3UZ39 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lrrfip1Q3UZ39 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lrrfip1Q3UZ39 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm2451-201ENSMUST00000199447 999 ntBASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Gm10290-201ENSMUST00000200451 999 ntBASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrfip1Q3UZ39 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrfip1Q3UZ39 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrfip1Q3UZ39 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Lrrfip1Q3UZ39 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms