Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf223Q3UV31 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.1□□□□□ -0.15
Rnf223Q3UV31 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf223Q3UV31 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm15487-201ENSMUST00000122373 465 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm10275-202ENSMUST00000168697 495 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm46209-201ENSMUST00000217912 553 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Gm10275-201ENSMUST00000092620 635 ntBASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf223Q3UV31 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf223Q3UV31 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf223Q3UV31 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Mir7684-201ENSMUST00000183858 60 ntBASIC14.08□□□□□ -0.16
Rnf223Q3UV31 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.08□□□□□ -0.16
Rnf223Q3UV31 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf223Q3UV31 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms