Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.53□□□□□ -0.08
Fam196aQ3USH1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.52□□□□□ -0.08
Fam196aQ3USH1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fam196aQ3USH1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm12928-201ENSMUST00000117115 573 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm15429-201ENSMUST00000151268 798 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm40466-201ENSMUST00000212174 422 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fam196aQ3USH1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm12384-201ENSMUST00000119228 919 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm43822-201ENSMUST00000200285 476 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fam196aQ3USH1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms