Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Gm12416-201ENSMUST00000120911 1008 ntBASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Gm15429-201ENSMUST00000151268 798 ntBASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Gm44799-201ENSMUST00000207639 1202 ntBASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gm14660-201ENSMUST00000119809 575 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Mir3102-201ENSMUST00000175555 104 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gm45784-201ENSMUST00000188360 142 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gm37424-201ENSMUST00000191727 561 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Gm8399-201ENSMUST00000082300 1117 ntBASIC21.04■□□□□ 0.96
Arhgef40Q3UPH7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Gm8598-201ENSMUST00000221184 836 ntBASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 AC125117.1-201ENSMUST00000228121 468 ntBASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Arhgef40Q3UPH7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Gm24196-201ENSMUST00000179161 110 ntBASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Gm8652-201ENSMUST00000181363 964 ntBASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Gm43179-201ENSMUST00000198797 275 ntBASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Arhgef40Q3UPH7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Arhgef40Q3UPH7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Arhgef40Q3UPH7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms