Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Syt7-205ENSMUST00000224135 1557 ntBASIC14.74□□□□□ -0.05
Ebf1Q07802 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.74□□□□□ -0.05
Ebf1Q07802 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Ebf1Q07802 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.73□□□□□ -0.05
Ebf1Q07802 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.73□□□□□ -0.05
Ebf1Q07802 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.73□□□□□ -0.05
Ebf1Q07802 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Gm44855-201ENSMUST00000205725 362 ntBASIC14.73□□□□□ -0.05
Ebf1Q07802 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.73□□□□□ -0.05
Ebf1Q07802 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.73□□□□□ -0.05
Ebf1Q07802 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.73□□□□□ -0.05
Ebf1Q07802 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ebf1Q07802 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ebf1Q07802 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ebf1Q07802 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.72□□□□□ -0.05
Ebf1Q07802 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ebf1Q07802 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.72□□□□□ -0.05
Ebf1Q07802 Gm28631-201ENSMUST00000190740 334 ntBASIC14.72□□□□□ -0.05
Ebf1Q07802 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ebf1Q07802 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.72□□□□□ -0.05
Ebf1Q07802 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.72□□□□□ -0.05
Ebf1Q07802 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ebf1Q07802 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.71□□□□□ -0.05
Ebf1Q07802 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.71□□□□□ -0.05
Ebf1Q07802 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.71□□□□□ -0.05
Ebf1Q07802 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.71□□□□□ -0.05
Ebf1Q07802 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.71□□□□□ -0.05
Ebf1Q07802 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ebf1Q07802 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ebf1Q07802 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.71□□□□□ -0.06
Ebf1Q07802 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ebf1Q07802 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms