Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Nkx3-2P97503 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.77□□□□□ -0.21
Nkx3-2P97503 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.77□□□□□ -0.21
Nkx3-2P97503 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.77□□□□□ -0.21
Nkx3-2P97503 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.77□□□□□ -0.21
Nkx3-2P97503 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nkx3-2P97503 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Gm22175-201ENSMUST00000175007 78 ntBASIC13.76□□□□□ -0.21
Nkx3-2P97503 Gm9824-201ENSMUST00000178707 561 ntBASIC13.76□□□□□ -0.21
Nkx3-2P97503 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.76□□□□□ -0.21
Nkx3-2P97503 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx3-2P97503 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Mir7023-201ENSMUST00000185093 64 ntBASIC13.75□□□□□ -0.21
Nkx3-2P97503 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx3-2P97503 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.74□□□□□ -0.21
Nkx3-2P97503 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx3-2P97503 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms