Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcaP82350 Gm18032-201ENSMUST00000222541 538 ntBASIC12.21□□□□□ -0.45
SgcaP82350 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcaP82350 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SgcaP82350 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SgcaP82350 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.21□□□□□ -0.46
SgcaP82350 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.2□□□□□ -0.46
SgcaP82350 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.2□□□□□ -0.46
SgcaP82350 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Rprl3-201ENSMUST00000157400 290 ntBASIC12.2□□□□□ -0.46
SgcaP82350 Gm44454-201ENSMUST00000198541 138 ntBASIC12.2□□□□□ -0.46
SgcaP82350 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.2□□□□□ -0.46
SgcaP82350 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.2□□□□□ -0.46
SgcaP82350 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.2□□□□□ -0.46
SgcaP82350 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SgcaP82350 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcaP82350 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SgcaP82350 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Gm11950-201ENSMUST00000121615 838 ntBASIC12.19□□□□□ -0.46
SgcaP82350 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.19□□□□□ -0.46
SgcaP82350 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.19□□□□□ -0.46
SgcaP82350 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.19□□□□□ -0.46
SgcaP82350 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcaP82350 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SgcaP82350 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.19□□□□□ -0.46
SgcaP82350 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcaP82350 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
SgcaP82350 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms