Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.52□□□□□ -0.41
Otx1P80205 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.52□□□□□ -0.41
Otx1P80205 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.52□□□□□ -0.41
Otx1P80205 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Otx1P80205 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.52□□□□□ -0.41
Otx1P80205 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Otx1P80205 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Otx1P80205 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Otx1P80205 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.51□□□□□ -0.41
Otx1P80205 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.51□□□□□ -0.41
Otx1P80205 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.51□□□□□ -0.41
Otx1P80205 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.51□□□□□ -0.41
Otx1P80205 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.51□□□□□ -0.41
Otx1P80205 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Otx1P80205 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Otx1P80205 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.5□□□□□ -0.41
Otx1P80205 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.5□□□□□ -0.41
Otx1P80205 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.5□□□□□ -0.41
Otx1P80205 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.5□□□□□ -0.41
Otx1P80205 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.5□□□□□ -0.41
Otx1P80205 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Otx1P80205 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.5□□□□□ -0.41
Otx1P80205 Gm18057-201ENSMUST00000208220 503 ntBASIC12.5□□□□□ -0.41
Otx1P80205 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.5□□□□□ -0.41
Otx1P80205 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms